[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 54 items for (author: chi & xm)

EMDB-35393:
Human SLC26A3 in the apo state
Method: single particle / : Li XR, Chi XM, Zhang YY, Zhou Q

EMDB-33469:
Down-regulated in adenoma in complex with TQR1122
Method: single particle / : Li XR, Chi XM, Zhang YY, Zhou Q

EMDB-34259:
cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34261:
cryo-EM structure of Omicron BA.5 S protein in complex with XGv289
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34263:
cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-33473:
Human SLC26A3 in complex with Tenidap
Method: single particle / : Li XR, Chi XM, Zhang YY, Zhou Q

EMDB-33471:
Human SLC26A3 in complex with UK5099
Method: single particle / : Li XR, Chi XM, Zhang YY, Zhou Q

EMDB-33284:
Human diastrophic dysplasia sulfate transporter SLC26A2
Method: single particle / : Chi XM, Zhou Q

EMDB-32865:
Choline transporter-like protein 1
Method: single particle / : Chi XM, Zhou Q

EMDB-30947:
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-30948:
Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-30949:
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-31252:
cryo EM map of Erastin-bound xCT-4F2hc complex, focused refined on transmembrane region
Method: single particle / : Yan RH, Li YN, Zhang YY

EMDB-31251:
Overall structure of Erastin-bound xCT-4F2hc complex
Method: single particle / : Yan RH, Li YN, Zhang YY, Chi XM, Zhou Q

EMDB-30356:
Cryo EM map of the nucleotide free MlaFEDB complex,focused refined on extracellular region
Method: single particle / : Chi XM, Fan QX, Zhang YY, Liang K, Zhou Q, Li YY

EMDB-30357:
Cryo EM map of the nucleotide free MlaFEDB complex, focused refined on intracellular region and transmembrane region
Method: single particle / : Chi XM, Fan QX, Zhang YY, Liang K, Zhou Q, Li YY

EMDB-30888:
Conformation 1 of S-ACE2-B0AT1 ternary complex
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30889:
S protein of SARS-CoV-2 in the locked conformation
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30890:
S protein of SARS-CoV-2 in the active conformation
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30891:
Trypsin-digested S protein of SARS-CoV-2
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30892:
S protein of SARS-CoV-2 D614G mutant
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30893:
Trypsin-digested S protein of SARS-CoV-2 D614G mutant
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30894:
S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 1 (1 up RBD and no PD bound)
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30896:
S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (1 up RBD and 1 PD bound)
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30897:
S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 3 (2 up RBD and 1 PD bound)
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30898:
Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 1 (1 up RBD and 1 PD bound)
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30899:
Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (2 up RBD and 2 PD bound)
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30900:
Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 3 (3 up RBD and 2 PD bound)
Method: single particle / : Yan RH, Zhang YY, Li YN, Ye FF, Guo YY, Xia L, Zhong XY, Chi XM, Zhou Q

EMDB-30049:
The overall structure of KCC3
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30058:
KCC3 bound with DIOA
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30061:
cryo_EM map of KCC2
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30050:
Molecular basis for regulation of human potassium chloride cotransporters
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30051:
cryo_EM map of KCC3, focused refined on transmembrane region
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30059:
cryo_EM map of KCC3 bound with DIOA, focused refined on extracellular region
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30060:
cryo_EM map of KCC3 bound with DIOA, focused refined on transmembrane region
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30062:
cryo_EM map of KCC2, focused refined on extracellular region
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30063:
cryo_EM map of KCC2, focused refined on transmembrane region
Method: single particle / : Chi XM, Li XR, Chen Y, Zhang YY, Su Q, Zhou Q

EMDB-30355:
Cryo_EM map of nucleotide free MlaFEDB complex
Method: single particle / : Chi XM, Fan QX

EMDB-30358:
Cryo EM map of the MlaFEDB complex in ATP-bound EQtall conformation (Mutation of E170Q on MlaF)
Method: single particle / : Chi XM, Fan QX

EMDB-30367:
Cryo EM map of the MlaFEDB complex in ATP-bound EQclose conformation (Mutation of E170Q on MlaF)
Method: single particle / : Chi XM, Fan QX

EMDB-30368:
cryo_EM map of SLC26A9
Method: single particle / : Chi XM, Chen Y

EMDB-9823:
Structure of RyR2 (Ca2+ alone dataset)
Method: single particle / : Chi XM, Gong DS

EMDB-9824:
Structure of RyR2 (F/P/Ca2+ dataset)
Method: single particle / : Chi XM, Gong DS

EMDB-9825:
Structure of RyR2 (F/A/Ca2+ dataset)
Method: single particle / : Chi XM, Gong DS

EMDB-9826:
Structure of RyR2 (F/C/Ca2+ dataset)
Method: single particle / : Chi XM, Gong DS

EMDB-9831:
Structure of RyR2 (F/A/C/Ca2+ dataset)
Method: single particle / : Gong DS, Chi XM

EMDB-9833:
Structure of RyR2 (F/apoCaM dataset)
Method: single particle / : Gong DS, Chi XM

EMDB-9834:
Structure of RyR2 (F/A/C/L-Ca2+/apo-CaM-M dataset)
Method: single particle / : Gong DS, Chi XM

EMDB-9836:
Structure of RyR2 (F/A/C/L-Ca2+/Ca2+CaM dataset)
Method: single particle / : Gong DS, Chi XM

EMDB-9837:
Structure of RyR2 (F/A/C/H-Ca2+/Ca2+CaM dataset)
Method: single particle / : Gong DS, Chi XM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more